Publications

Training an automated circulating tumor cell classifier when the true

PNAS nexus, February 9, 2025

Nanou A, Stoecklein NH, Doerr D, Driemel C, Terstappen LWMM, Coumans FAW

Panacus: fast and exact pangenome growth and core size estimation

Bioinformatics, November 9, 2024

Parmigiani L, Garrison E, Stoye J, Marschall T, Doerr D

Reconstructing rearrangement phylogenies of natural genomes

Proc of WABI'24, August 26, 2024

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Bohnenkämper L, Stoye J, Doerr D

AGO, a framework for the reconstruction of ancestral syntenies and gene

Methods Mol Biol, June 1, 2024

Cribbie EP, Doerr D, Chauve C

Family-Free Genome Comparison

Methods Mol Biol, June 1, 2024

Braga MDV, Doerr D, Rubert DP, Stoye J

A Draft Human Pangenome Reference

Nature, May 10, 2023

Liao W*, Asri M*, Ebler J*, Doerr D, Haukness M, Hickey G, Lu S, Lucas JK, Monlong J, Abel HJ, Buonaiuto S, Chang XH, Cheng H, Chu J, Colonna V, Eizenga JM, Feng X, Fischer C, Fulton RS, Garg S, Groza C, Guarracino A, Harvey WT, Heumos S, Howe K, Jain M, Lu T, Markello C, Martin FJ, Mitchell MW, Munson KM, Mwaniki MN, Novak AM, Olsen HE, Pesout T, Porubsky D, Prins P, Sibbesen JA, Tomlinson C, Villani F, Vollger MR, Human Pangenome Reference Consortium, Bourque G, Chaisson MJ, Flicek P, Phillippy AM, Zook JM, Eichler EE, Haussler D, Jarvis ED, Miga KH, Wang T, Garrison E†, Marschall T†, Hall I†, Li H†, Paten B†